Table 2 Summary of nanopore sequence data bearing on the fate of transgenes from four A. castellanii transformants
From: The fate of artificial transgenes in Acanthamoeba castellanii
Clone | Plasmid topology | Estimatedgenome coverage | Inferred integrations | With 2 reads | With > 2 reads | # of artefactual chimeras | 1-telomere reads | 2-telomere reads |
|---|---|---|---|---|---|---|---|---|
C1 | circular | 100X | 1 251 | 25 | 1 | 936 | 288 | 3 |
LT6 | linear | 50X | 280 | 0 | 0 | 336 | 85 | 3 |
LT8 | linear | 100X | 187 | 2 | 0 | 438 | 32 | 1 |
LT9 | linear | 65X | 109 | 1 | 0 | 185 | 45 | 0 |